READMEdnp01-giant-fiber.md

DNp01 (giant fiber)

systemDescending and motor neuronsspeciesD. melanogaster3D view2 of 626 cellssources7

DNp01, the giant fiber, is a large descending neuron of the fruit fly that triggers escape. A giant fiber on each side carries looming signals from the brain to the thoracic nerve cord, where it drives the leg and wing muscles of a rapid takeoff.

Also known asGiant fiber · Giant fibre · GF · Giant fiber neuron
RegionPosterior brain; axon descends to the thoracic ganglion of the ventral nerve cord
SystemDescending and motor neurons
In the display bundle2 of the 626 reconstructed neurons in the site’s MaleCNS display bundle, which shows 626 of the model’s 166,700 neurons: DNp01 2

What it is

In the descending neuron nomenclature, “DN” marks a descending neuron, “p” a cell body on the posterior surface of the brain and “01” its number: the giant fiber is DNp01 (Namiki et al., 2018). The giant fiber system is the neural circuit that mediates the fly’s escape response to visual stimuli (Allen et al., 2006).

Where it sits

The giant fiber innervates the LC4 optic glomerulus in the brain (Namiki et al., 2018), and its axon descends through the neck to the thoracic ganglion. There its signal is relayed to leg and wing muscle motor neurons (Allen et al., 2006; Tanouye and Wyman, 1980), including the jump muscle motor neuron (Klapoetke et al., 2017).

What it does

Faced with a looming stimulus, a fly makes either a long escape sequence that leads to stable flight or a short one that sacrifices stability for speed. The timing of a giant fiber spike relative to parallel escape circuits determines which one occurs: the giant fiber has a higher activation threshold but can override ongoing behavior to force the short takeoff (von Reyn et al., 2014).

The giant fiber sums two visual features of the approaching object: its angular expansion velocity, from LC4, and its angular size, from LPLC2 (von Reyn et al., 2017; Ache et al., 2019).

3D view: DNp01

MaleCNS v1.0 · 2 of 626 reconstructed neurons

The 3D view needs JavaScript and WebGL.

2 of 626 reconstructed neurons in this display bundle

Highlighted: the DNp01 cells among the 626 reconstructed neurons of the site’s display bundle, which shows 626 of the 166,700 neurons in the MaleCNS v1.0 model with skeletons simplified for the web. Anatomy only: a highlight marks cell identity, not activity. Anatomy: MaleCNS v1.0, FlyEM / HHMI Janelia, CC BY 4.0.

In TheFlyBrain

In TheFlyBrain experiments

DNp01 is the escape readout throughout the registry. In the Looming Escape (Fly Swatter) experiment, a measured DNp01 spike in a window that ends before contact triggers the pre-programmed takeoff; the Motor Circuits Bench drives it directly and measures downstream propagation. The display bundle also contains motor neurons of the tergotrochanteral muscle (type Tergotr. MN), the jump muscle.

6 experiments name these cells in their setup or measurement notes. On the workstation, what the fly sees reaches the fixed 166,700-neuron model and spikes are recorded from cells like these.

  • 0001Media ObservationTimed cues stimulate LC10a and LC4/LPLC2 through the engineered movie-cues-v1 encoder. Over 700 ms of model time, mean DNa02 rate plus 0.25 x DNp01 rate is compared with a threshold to request a board visit.
  • 0011Motor Circuits BenchNine channels: DNa02 steering, DNp01 escape, DNg100 forward walking, MDN backward walking, BRK halting, DNp09 running/freezing, aDN1 + aDN2 anterior grooming, DNp29 abdominal grooming, MN9 proboscis output.
  • 0045Torture Chamber: Six Documented DevicesDefault input is retina only. Optional direct contact/load drives the station's annotated tactile, chordotonal or campaniform populations; direct loom/escape drives LC4/LPLC2 and DNp01, at amplitude 0–1.2.
  • 0053The Ludovico TechniqueThe panel reports measured spikes for LC4 + LPLC2 (looming), LC10a (small target), HS + H2 (horizontal motion), DNa02 (steering) and DNp01 (giant fiber).
  • 0070Looming Escape (Fly Swatter)Each 200 ms window carries ten 20 ms retinal frames, so the loom expands step by step; measured readouts are DNp01 and LC4 + LPLC2.
  • 0072DreamachineMeasured readouts: LC4 + LPLC2, DNp01, HS + H2 and VS. Input is retinal only; weights are fixed.

Sources

  1. Namiki S, Dickinson MH, Wong AM, Korff W, Card GM (2018). The functional organization of descending sensory-motor pathways in Drosophila. eLife 7:e34272. doi:10.7554/eLife.34272
  2. Allen MJ, Godenschwege TA, Tanouye MA, Phelan P (2006). Making an escape: Development and function of the Drosophila giant fibre system. Seminars in Cell & Developmental Biology 17:31–41. doi:10.1016/j.semcdb.2005.11.011
  3. Tanouye MA, Wyman RJ (1980). Motor outputs of giant nerve fiber in Drosophila. Journal of Neurophysiology 44:405–421. doi:10.1152/jn.1980.44.2.405
  4. von Reyn CR, Breads P, Peek MY, et al. (2014). A spike-timing mechanism for action selection. Nature Neuroscience 17:962–970. doi:10.1038/nn.3741
  5. von Reyn CR, Nern A, Williamson WR, et al. (2017). Feature Integration Drives Probabilistic Behavior in the Drosophila Escape Response. Neuron 94:1190–1204.e6. doi:10.1016/j.neuron.2017.05.036
  6. Ache JM, Polsky J, Alghailani S, et al. (2019). Neural Basis for Looming Size and Velocity Encoding in the Drosophila Giant Fiber Escape Pathway. Current Biology 29:1073–1081.e4. doi:10.1016/j.cub.2019.01.079
  7. Klapoetke NC, Nern A, Peek MY, et al. (2017). Ultra-selective looming detection from radial motion opponency. Nature 551:237–241. doi:10.1038/nature24626

Anatomy in the 3D view: MaleCNS v1.0, FlyEM / HHMI Janelia, CC BY 4.0. Summaries on this page describe published findings in living flies; the workstation’s model is a fixed-weight spiking model of the wiring diagram.

Glossary: Descending neuron · Looming · Ventral nerve cord (VNC) · Motor neuron